Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cbx3P23198 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.68□□□□□ -0.54
Cbx3P23198 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.68□□□□□ -0.54
Cbx3P23198 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cbx3P23198 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Cbx3P23198 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.68□□□□□ -0.54
Cbx3P23198 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.68□□□□□ -0.54
Cbx3P23198 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.68□□□□□ -0.54
Cbx3P23198 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.68□□□□□ -0.54
Cbx3P23198 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.68□□□□□ -0.54
Cbx3P23198 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.68□□□□□ -0.54
Cbx3P23198 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cbx3P23198 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.68□□□□□ -0.54
Cbx3P23198 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cbx3P23198 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cbx3P23198 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Cbx3P23198 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cbx3P23198 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.67□□□□□ -0.54
Cbx3P23198 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cbx3P23198 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.67□□□□□ -0.54
Cbx3P23198 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.67□□□□□ -0.54
Cbx3P23198 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cbx3P23198 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.67□□□□□ -0.54
Cbx3P23198 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.67□□□□□ -0.54
Cbx3P23198 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cbx3P23198 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Rpph1-201ENSMUST00000175096 319 ntBASIC11.67□□□□□ -0.54
Cbx3P23198 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.67□□□□□ -0.54
Cbx3P23198 Gm17968-201ENSMUST00000194902 784 ntBASIC11.67□□□□□ -0.54
Cbx3P23198 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.67□□□□□ -0.54
Cbx3P23198 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.67□□□□□ -0.54
Cbx3P23198 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.67□□□□□ -0.54
Cbx3P23198 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.67□□□□□ -0.54
Cbx3P23198 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.67□□□□□ -0.54
Cbx3P23198 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cbx3P23198 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cbx3P23198 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms