Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lire1P11260 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lire1P11260 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.26□□□□□ -0.45
Lire1P11260 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.25□□□□□ -0.45
Lire1P11260 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.25□□□□□ -0.45
Lire1P11260 Gm37714-201ENSMUST00000194742 342 ntBASIC12.25□□□□□ -0.45
Lire1P11260 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.25□□□□□ -0.45
Lire1P11260 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.25□□□□□ -0.45
Lire1P11260 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.25□□□□□ -0.45
Lire1P11260 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Lire1P11260 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.25□□□□□ -0.45
Lire1P11260 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.25□□□□□ -0.45
Lire1P11260 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lire1P11260 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Lire1P11260 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.25□□□□□ -0.45
Lire1P11260 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lire1P11260 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Lire1P11260 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lire1P11260 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Lire1P11260 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Lire1P11260 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lire1P11260 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.24□□□□□ -0.45
Lire1P11260 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.24□□□□□ -0.45
Lire1P11260 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.24□□□□□ -0.45
Lire1P11260 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.24□□□□□ -0.45
Lire1P11260 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.24□□□□□ -0.45
Lire1P11260 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lire1P11260 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Lire1P11260 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.24□□□□□ -0.45
Lire1P11260 Gm27486-201ENSMUST00000184923 80 ntBASIC12.24□□□□□ -0.45
Lire1P11260 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Lire1P11260 Gm18905-201ENSMUST00000205454 928 ntBASIC12.24□□□□□ -0.45
Lire1P11260 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.24□□□□□ -0.45
Lire1P11260 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.24□□□□□ -0.45
Lire1P11260 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lire1P11260 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms