Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm13453-201ENSMUST00000118708 357 ntBASIC12.17□□□□□ -0.46
ApoeP08226 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.17□□□□□ -0.46
ApoeP08226 Gm24513-201ENSMUST00000174964 138 ntBASIC12.17□□□□□ -0.46
ApoeP08226 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.17□□□□□ -0.46
ApoeP08226 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.17□□□□□ -0.46
ApoeP08226 Gm26315-201ENSMUST00000083890 321 ntBASIC12.17□□□□□ -0.46
ApoeP08226 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ApoeP08226 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
ApoeP08226 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.17□□□□□ -0.46
ApoeP08226 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ApoeP08226 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.16□□□□□ -0.46
ApoeP08226 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ApoeP08226 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Gm9630-201ENSMUST00000178304 885 ntBASIC12.16□□□□□ -0.46
ApoeP08226 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Gm27397-201ENSMUST00000184997 107 ntBASIC12.16□□□□□ -0.46
ApoeP08226 Gm19184-201ENSMUST00000196798 928 ntBASIC12.16□□□□□ -0.46
ApoeP08226 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.16□□□□□ -0.46
ApoeP08226 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.16□□□□□ -0.46
ApoeP08226 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.16□□□□□ -0.46
ApoeP08226 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.16□□□□□ -0.46
ApoeP08226 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ApoeP08226 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.15□□□□□ -0.46
ApoeP08226 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ApoeP08226 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ApoeP08226 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ApoeP08226 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Mir686-201ENSMUST00000102174 109 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.15□□□□□ -0.46
ApoeP08226 Gm13813-201ENSMUST00000120998 787 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Gm14822-201ENSMUST00000122247 291 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Gm5279-201ENSMUST00000199575 745 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Gm9063-201ENSMUST00000223299 582 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ApoeP08226 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms