Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CfdP03953 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.74□□□□□ -0.69
CfdP03953 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CfdP03953 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.73□□□□□ -0.69
CfdP03953 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Gm4995-201ENSMUST00000117247 432 ntBASIC10.73□□□□□ -0.69
CfdP03953 Gm12485-201ENSMUST00000119641 291 ntBASIC10.73□□□□□ -0.69
CfdP03953 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.73□□□□□ -0.69
CfdP03953 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.73□□□□□ -0.69
CfdP03953 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.73□□□□□ -0.69
CfdP03953 Gm19184-201ENSMUST00000196798 928 ntBASIC10.73□□□□□ -0.69
CfdP03953 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.73□□□□□ -0.69
CfdP03953 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CfdP03953 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CfdP03953 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CfdP03953 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CfdP03953 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.72□□□□□ -0.69
CfdP03953 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CfdP03953 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.72□□□□□ -0.69
CfdP03953 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
CfdP03953 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CfdP03953 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
CfdP03953 Gm25144-201ENSMUST00000179561 110 ntBASIC10.72□□□□□ -0.69
CfdP03953 Gm25352-201ENSMUST00000179815 110 ntBASIC10.72□□□□□ -0.69
CfdP03953 Gm27321-201ENSMUST00000185021 205 ntBASIC10.72□□□□□ -0.69
CfdP03953 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.72□□□□□ -0.69
CfdP03953 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
CfdP03953 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
CfdP03953 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CfdP03953 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CfdP03953 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CfdP03953 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CfdP03953 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CfdP03953 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.71□□□□□ -0.69
CfdP03953 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CfdP03953 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CfdP03953 Gm13813-201ENSMUST00000120998 787 ntBASIC10.71□□□□□ -0.69
CfdP03953 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.71□□□□□ -0.69
CfdP03953 Gm11978-201ENSMUST00000122315 466 ntBASIC10.71□□□□□ -0.69
CfdP03953 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms