Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm16296-201ENSMUST00000159905 325 ntBASIC11.1□□□□□ -0.63
Igh-VJ558P01758 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Gm19163-201ENSMUST00000223313 780 ntBASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igh-VJ558P01758 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm11478-201ENSMUST00000117851 599 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm15703-201ENSMUST00000120250 880 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm26927-201ENSMUST00000182385 965 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm29649-201ENSMUST00000185649 419 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm29127-201ENSMUST00000188304 517 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.08□□□□□ -0.64
Igh-VJ558P01758 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms