Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Vti1aO89116 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Vti1aO89116 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.88□□□□□ -0.19
Vti1aO89116 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vti1aO89116 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Vti1aO89116 Gm11637-201ENSMUST00000120601 592 ntBASIC13.88□□□□□ -0.19
Vti1aO89116 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Vti1aO89116 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.88□□□□□ -0.19
Vti1aO89116 Mir3102-201ENSMUST00000175555 104 ntBASIC13.88□□□□□ -0.19
Vti1aO89116 Gm18827-201ENSMUST00000188341 790 ntBASIC13.88□□□□□ -0.19
Vti1aO89116 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Vti1aO89116 Gm38158-201ENSMUST00000194617 339 ntBASIC13.88□□□□□ -0.19
Vti1aO89116 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.88□□□□□ -0.19
Vti1aO89116 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Vti1aO89116 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.88□□□□□ -0.19
Vti1aO89116 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.88□□□□□ -0.19
Vti1aO89116 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.87□□□□□ -0.19
Vti1aO89116 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Vti1aO89116 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.87□□□□□ -0.19
Vti1aO89116 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Vti1aO89116 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.87□□□□□ -0.19
Vti1aO89116 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Vti1aO89116 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1aO89116 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.87□□□□□ -0.19
Vti1aO89116 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Gm24255-201ENSMUST00000104481 128 ntBASIC13.86□□□□□ -0.19
Vti1aO89116 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.86□□□□□ -0.19
Vti1aO89116 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.86□□□□□ -0.19
Vti1aO89116 Gm18584-201ENSMUST00000203098 964 ntBASIC13.86□□□□□ -0.19
Vti1aO89116 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vti1aO89116 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vti1aO89116 Gm6082-201ENSMUST00000215204 454 ntBASIC13.86□□□□□ -0.19
Vti1aO89116 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vti1aO89116 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vti1aO89116 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vti1aO89116 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vti1aO89116 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1aO89116 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms