Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.63□□□□□ -0.39
ClppO88696 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
ClppO88696 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.62□□□□□ -0.39
ClppO88696 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.62□□□□□ -0.39
ClppO88696 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.62□□□□□ -0.39
ClppO88696 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.62□□□□□ -0.39
ClppO88696 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.62□□□□□ -0.39
ClppO88696 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.62□□□□□ -0.39
ClppO88696 Gm19184-201ENSMUST00000196798 928 ntBASIC12.62□□□□□ -0.39
ClppO88696 Gm42627-201ENSMUST00000197347 224 ntBASIC12.62□□□□□ -0.39
ClppO88696 Gm18054-201ENSMUST00000207539 555 ntBASIC12.62□□□□□ -0.39
ClppO88696 Gm7399-201ENSMUST00000032395 858 ntBASIC12.62□□□□□ -0.39
ClppO88696 Snora73a-201ENSMUST00000082453 205 ntBASIC12.62□□□□□ -0.39
ClppO88696 Gm10268-201ENSMUST00000085340 555 ntBASIC12.62□□□□□ -0.39
ClppO88696 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClppO88696 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.62□□□□□ -0.39
ClppO88696 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.62□□□□□ -0.39
ClppO88696 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.62□□□□□ -0.39
ClppO88696 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClppO88696 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.61□□□□□ -0.39
ClppO88696 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.61□□□□□ -0.39
ClppO88696 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.61□□□□□ -0.39
ClppO88696 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.61□□□□□ -0.39
ClppO88696 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.61□□□□□ -0.39
ClppO88696 Gm2231-201ENSMUST00000125661 612 ntBASIC12.61□□□□□ -0.39
ClppO88696 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.61□□□□□ -0.39
ClppO88696 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.61□□□□□ -0.39
ClppO88696 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.61□□□□□ -0.39
ClppO88696 Gm27572-201ENSMUST00000183702 255 ntBASIC12.61□□□□□ -0.39
ClppO88696 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ClppO88696 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.61□□□□□ -0.39
ClppO88696 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
ClppO88696 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.61□□□□□ -0.39
ClppO88696 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClppO88696 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.6□□□□□ -0.39
ClppO88696 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.6□□□□□ -0.39
ClppO88696 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ClppO88696 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
ClppO88696 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms