Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.72□□□□□ -0.37
Pdlim1O70400 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.72□□□□□ -0.37
Pdlim1O70400 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm5370-201ENSMUST00000187187 574 ntBASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm18584-201ENSMUST00000203098 964 ntBASIC12.72□□□□□ -0.37
Pdlim1O70400 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.72□□□□□ -0.37
Pdlim1O70400 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.72□□□□□ -0.37
Pdlim1O70400 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.72□□□□□ -0.37
Pdlim1O70400 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim1O70400 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.71□□□□□ -0.37
Pdlim1O70400 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.71□□□□□ -0.37
Pdlim1O70400 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Mir7085-201ENSMUST00000184353 66 ntBASIC12.71□□□□□ -0.37
Pdlim1O70400 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.71□□□□□ -0.37
Pdlim1O70400 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.71□□□□□ -0.37
Pdlim1O70400 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.71□□□□□ -0.37
Pdlim1O70400 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim1O70400 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim1O70400 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms