Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Slc1a6O35544 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Slc1a6O35544 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc1a6O35544 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Slc1a6O35544 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Slc1a6O35544 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc1a6O35544 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Gm27702-201ENSMUST00000184512 56 ntBASIC12.65□□□□□ -0.38
Slc1a6O35544 Gm29667-201ENSMUST00000190817 490 ntBASIC12.65□□□□□ -0.38
Slc1a6O35544 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.65□□□□□ -0.38
Slc1a6O35544 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Gm26035-201ENSMUST00000083065 308 ntBASIC12.65□□□□□ -0.38
Slc1a6O35544 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc1a6O35544 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc1a6O35544 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc1a6O35544 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc1a6O35544 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm15371-201ENSMUST00000117057 784 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm12291-201ENSMUST00000121627 311 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm5354-201ENSMUST00000182417 973 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc1a6O35544 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.64□□□□□ -0.39
Slc1a6O35544 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc1a6O35544 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Slc1a6O35544 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms