Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Raet1aO08602 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Raet1aO08602 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.41□□□□□ -0.58
Raet1aO08602 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.41□□□□□ -0.58
Raet1aO08602 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Raet1aO08602 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.41□□□□□ -0.58
Raet1aO08602 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Raet1aO08602 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Raet1aO08602 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Raet1aO08602 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.4□□□□□ -0.58
Raet1aO08602 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Raet1aO08602 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Raet1aO08602 Gm12291-201ENSMUST00000121627 311 ntBASIC11.4□□□□□ -0.58
Raet1aO08602 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Gm26185-201ENSMUST00000157692 266 ntBASIC11.4□□□□□ -0.58
Raet1aO08602 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.4□□□□□ -0.58
Raet1aO08602 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.4□□□□□ -0.58
Raet1aO08602 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.4□□□□□ -0.58
Raet1aO08602 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.4□□□□□ -0.58
Raet1aO08602 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.4□□□□□ -0.58
Raet1aO08602 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Gm10146-201ENSMUST00000072739 309 ntBASIC11.4□□□□□ -0.58
Raet1aO08602 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Raet1aO08602 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Raet1aO08602 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Raet1aO08602 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Raet1aO08602 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Raet1aO08602 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Raet1aO08602 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Raet1aO08602 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Raet1aO08602 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Raet1aO08602 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Raet1aO08602 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.4□□□□□ -0.59
Raet1aO08602 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.39□□□□□ -0.59
Raet1aO08602 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Gm14704-201ENSMUST00000120300 874 ntBASIC11.39□□□□□ -0.59
Raet1aO08602 Gm13813-201ENSMUST00000120998 787 ntBASIC11.39□□□□□ -0.59
Raet1aO08602 Gm2231-201ENSMUST00000125661 612 ntBASIC11.39□□□□□ -0.59
Raet1aO08602 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Gm24644-201ENSMUST00000157114 139 ntBASIC11.39□□□□□ -0.59
Raet1aO08602 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Gm27847-201ENSMUST00000183711 107 ntBASIC11.39□□□□□ -0.59
Raet1aO08602 Gm27375-201ENSMUST00000183799 107 ntBASIC11.39□□□□□ -0.59
Raet1aO08602 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.39□□□□□ -0.59
Raet1aO08602 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.39□□□□□ -0.59
Raet1aO08602 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.39□□□□□ -0.59
Raet1aO08602 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Raet1aO08602 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Raet1aO08602 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms