Protein–RNA interactions for Protein: J9JI28

Vwa3b, von Willebrand factor A domain-containing 3B, mousemouse

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vwa3bJ9JI28 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vwa3bJ9JI28 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vwa3bJ9JI28 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vwa3bJ9JI28 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vwa3bJ9JI28 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vwa3bJ9JI28 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vwa3bJ9JI28 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vwa3bJ9JI28 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Gm43818-201ENSMUST00000200605 466 ntBASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vwa3bJ9JI28 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Gm12291-201ENSMUST00000121627 311 ntBASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Gm44124-201ENSMUST00000204159 472 ntBASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Gm40466-201ENSMUST00000212174 422 ntBASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vwa3bJ9JI28 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Gm12384-201ENSMUST00000119228 919 ntBASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.17■□□□□ 0.02
Vwa3bJ9JI28 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vwa3bJ9JI28 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms