Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx1-1G3UXB3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-1G3UXB3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-1G3UXB3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-1G3UXB3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-1G3UXB3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-1G3UXB3 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm11470-201ENSMUST00000118868 1475 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm14109-201ENSMUST00000118814 309 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm22818-201ENSMUST00000157446 104 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm27033-201ENSMUST00000183226 544 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm5621-201ENSMUST00000187303 640 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm9555-201ENSMUST00000200908 583 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm7848-201ENSMUST00000210739 718 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm6458-201ENSMUST00000211573 635 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 AC155834.1-201ENSMUST00000220033 498 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm17415-201ENSMUST00000096427 789 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm44441-201ENSMUST00000203642 2475 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Gm42897-201ENSMUST00000201486 2112 ntBASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-1G3UXB3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Mir1898-201ENSMUST00000122643 83 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm24925-201ENSMUST00000178157 107 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm21045-201ENSMUST00000183058 1020 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm29663-201ENSMUST00000186962 853 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm29608-201ENSMUST00000190444 463 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm37072-201ENSMUST00000194570 837 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm18689-201ENSMUST00000203969 902 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm44770-201ENSMUST00000205395 1264 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC15.27■□□□□ 0.04
Nkx1-1G3UXB3 Gm45344-201ENSMUST00000211610 341 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms