Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm18304-201ENSMUST00000189162 546 ntBASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm7082-201ENSMUST00000209880 969 ntBASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 CT025618.1-201ENSMUST00000227409 1279 ntBASIC6.95□□□□□ -1.3
Herc1E9PZP8 AC123061.1-201ENSMUST00000228021 999 ntBASIC6.95□□□□□ -1.3
Herc1E9PZP8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm6992-201ENSMUST00000217973 1607 ntBASIC6.95□□□□□ -1.3
Herc1E9PZP8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC6.95□□□□□ -1.3
Herc1E9PZP8 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 CT571245.2-201ENSMUST00000218421 305 ntBASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Herc1E9PZP8 Gm44891-201ENSMUST00000208817 2223 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm9797-202ENSMUST00000218003 294 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm5040-201ENSMUST00000218609 800 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 n-R5s71-201ENSMUST00000093668 119 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm30671-201ENSMUST00000214898 318 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm6859-201ENSMUST00000218614 989 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 AC138604.1-201ENSMUST00000226969 739 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm16418-201ENSMUST00000118577 171 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm8343-201ENSMUST00000182705 994 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gm45090-201ENSMUST00000208775 1148 ntBASIC6.94□□□□□ -1.3
Herc1E9PZP8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC6.94□□□□□ -1.3
Herc1E9PZP8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms