Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Rprl1-202ENSMUST00000198476 238 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm22058-201ENSMUST00000083393 310 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm23949-201ENSMUST00000104027 127 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm18734-201ENSMUST00000172937 808 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm44651-201ENSMUST00000207343 372 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Col6a4A2AX52 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.83□□□□□ -0.67
Col6a4A2AX52 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm13736-201ENSMUST00000119272 253 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm11597-201ENSMUST00000121423 964 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm12134-201ENSMUST00000122109 520 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm6963-201ENSMUST00000147879 379 ntBASIC10.83□□□□□ -0.68
Col6a4A2AX52 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a4A2AX52 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms