Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc194A0A140LIT1 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Mir686-201ENSMUST00000102174 109 ntBASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc194A0A140LIT1 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc194A0A140LIT1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc194A0A140LIT1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms