Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm9025-201ENSMUST00000122415 1575 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm44711-201ENSMUST00000205414 1264 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 AC132104.2-201ENSMUST00000215011 266 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm8396-201ENSMUST00000057361 823 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Pck2-205ENSMUST00000226352 2784 ntBASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Trav13-4-dv7A0A075B6C2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms