Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm11637-201ENSMUST00000120601 592 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm26185-201ENSMUST00000157692 266 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm7653-201ENSMUST00000214567 508 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb2S4R1M3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm27847-201ENSMUST00000183711 107 ntBASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm27375-201ENSMUST00000183799 107 ntBASIC12.86□□□□□ -0.35
H2afb2S4R1M3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm5035-201ENSMUST00000215581 927 ntBASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb2S4R1M3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms