Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Gm26927-201ENSMUST00000182385 965 ntBASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Gm10146-201ENSMUST00000072739 309 ntBASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Gm5187-201ENSMUST00000117317 991 ntBASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Gm7029-201ENSMUST00000173226 450 ntBASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.69□□□□□ -0.54
Clcf1Q9QZM3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms