Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.83□□□□□ -0.19
Cpsf3Q9QXK7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf3Q9QXK7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf3Q9QXK7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf3Q9QXK7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.83□□□□□ -0.19
Cpsf3Q9QXK7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.83□□□□□ -0.19
Cpsf3Q9QXK7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Gm11793-201ENSMUST00000120433 981 ntBASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Gm8738-201ENSMUST00000172606 329 ntBASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Gm6013-201ENSMUST00000212264 699 ntBASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf3Q9QXK7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm7399-201ENSMUST00000032395 858 ntBASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf3Q9QXK7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Gm12502-201ENSMUST00000120197 444 ntBASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cpsf3Q9QXK7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms