Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim34aQ99PP6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim34aQ99PP6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim34aQ99PP6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim34aQ99PP6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim34aQ99PP6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim34aQ99PP6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim34aQ99PP6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim34aQ99PP6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm12217-201ENSMUST00000118858 696 ntBASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Mir6979-201ENSMUST00000183927 56 ntBASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Mir6927-201ENSMUST00000184494 71 ntBASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim34aQ99PP6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Gm14208-201ENSMUST00000119645 678 ntBASIC15.82■□□□□ 0.12
Trim34aQ99PP6 B9d1os-201ENSMUST00000137010 674 ntBASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Gm8385-201ENSMUST00000058999 643 ntBASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim34aQ99PP6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim34aQ99PP6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms