Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Gm13312-201ENSMUST00000119631 718 ntBASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gtf2a1Q99PM3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Gm21039-201ENSMUST00000223359 2012 ntBASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Gm43636-201ENSMUST00000201501 2235 ntBASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Gm4459-201ENSMUST00000118750 468 ntBASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gtf2a1Q99PM3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gtf2a1Q99PM3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm12497-201ENSMUST00000138778 237 ntBASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm19931-201ENSMUST00000198920 368 ntBASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm37447-201ENSMUST00000195625 2928 ntBASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gtf2a1Q99PM3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms