Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm12990-201ENSMUST00000120372 468 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm24844-201ENSMUST00000158679 127 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm6722-201ENSMUST00000221586 390 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Gm7902-201ENSMUST00000198842 947 ntBASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Sybu-209ENSMUST00000228639 4113 ntBASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.18□□□□□ -0.14
Pcdh15Q99PJ1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm43610-201ENSMUST00000199117 365 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm9645-201ENSMUST00000197131 792 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh15Q99PJ1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh15Q99PJ1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh15Q99PJ1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh15Q99PJ1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms