Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm12030-201ENSMUST00000121917 223 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm23085-201ENSMUST00000157849 293 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm26989-201ENSMUST00000182608 749 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Gm37852-201ENSMUST00000193027 350 ntBASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Gm10288-201ENSMUST00000084614 537 ntBASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh23Q99PF4 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.73□□□□□ -0.37
Cdh23Q99PF4 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Rprl1-201ENSMUST00000158050 327 ntBASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Gm2965-201ENSMUST00000198365 343 ntBASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Gm23045-201ENSMUST00000175041 96 ntBASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Gm8100-201ENSMUST00000182906 988 ntBASIC12.73□□□□□ -0.37
Cdh23Q99PF4 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdh23Q99PF4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdh23Q99PF4 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms