Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.66□□□□□ -0.22
Sf3b1Q99NB9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gm17376-201ENSMUST00000166016 84 ntBASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sf3b1Q99NB9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sf3b1Q99NB9 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.65□□□□□ -0.23
Sf3b1Q99NB9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Gm13492-201ENSMUST00000119772 665 ntBASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Gm23363-201ENSMUST00000175024 79 ntBASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Gm6082-201ENSMUST00000215204 454 ntBASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.64□□□□□ -0.23
Sf3b1Q99NB9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms