Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Gm8463-201ENSMUST00000208573 613 ntBASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cstf3Q99LI7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cstf3Q99LI7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Mir686-201ENSMUST00000102174 109 ntBASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cstf3Q99LI7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cstf3Q99LI7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.43□□□□□ -0.42
Cstf3Q99LI7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms