Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Gm6244-201ENSMUST00000178732 841 ntBASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.46□□□□□ -0.42
Vmp1Q99KU0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.46□□□□□ -0.42
Vmp1Q99KU0 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Gm18187-201ENSMUST00000196476 984 ntBASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Gm7287-201ENSMUST00000205267 602 ntBASIC12.45□□□□□ -0.42
Vmp1Q99KU0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.45□□□□□ -0.42
Vmp1Q99KU0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vmp1Q99KU0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Gm29608-201ENSMUST00000190444 463 ntBASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Gm5035-201ENSMUST00000215581 927 ntBASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Gm18473-201ENSMUST00000220543 868 ntBASIC12.44□□□□□ -0.42
Vmp1Q99KU0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.44□□□□□ -0.42
Vmp1Q99KU0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms