Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gm40466-201ENSMUST00000212174 422 ntBASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Gm14660-201ENSMUST00000119809 575 ntBASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 AY702102-202ENSMUST00000194651 1173 ntBASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha3Q91Y16 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Gm13369-201ENSMUST00000119442 987 ntBASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Gm11637-201ENSMUST00000120601 592 ntBASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms