Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gm17208-201ENSMUST00000168388 535 ntBASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb1Q91Y08 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm29649-201ENSMUST00000185649 419 ntBASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm6091-201ENSMUST00000098307 165 ntBASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb1Q91Y08 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Gm23363-201ENSMUST00000175024 79 ntBASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms