Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm15429-201ENSMUST00000151268 798 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm18187-201ENSMUST00000196476 984 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Gm16372-201ENSMUST00000073088 450 ntBASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhga11Q91XY8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Matn2-203ENSMUST00000226766 3252 ntBASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga11Q91XY8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms