Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Gm2231-201ENSMUST00000125661 612 ntBASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Gm43118-201ENSMUST00000199149 775 ntBASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Gm45930-201ENSMUST00000221330 292 ntBASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx41Q91VN6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Gm27501-201ENSMUST00000183599 107 ntBASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Mir8109-201ENSMUST00000184375 117 ntBASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx41Q91VN6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx41Q91VN6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx41Q91VN6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.77□□□□□ -0.05
Ddx41Q91VN6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx41Q91VN6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.77□□□□□ -0.05
Ddx41Q91VN6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.77□□□□□ -0.05
Ddx41Q91VN6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.77□□□□□ -0.05
Ddx41Q91VN6 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms