Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Gm13813-201ENSMUST00000120998 787 ntBASIC13.31□□□□□ -0.28
Trim60Q8VI40 Gm15429-201ENSMUST00000151268 798 ntBASIC13.31□□□□□ -0.28
Trim60Q8VI40 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.31□□□□□ -0.28
Trim60Q8VI40 Mir7654-201ENSMUST00000185082 70 ntBASIC13.31□□□□□ -0.28
Trim60Q8VI40 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim60Q8VI40 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Gm6152-201ENSMUST00000151704 340 ntBASIC13.3□□□□□ -0.28
Trim60Q8VI40 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.3□□□□□ -0.28
Trim60Q8VI40 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim60Q8VI40 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms