Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rprd1aQ8VDS4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Gm17420-201ENSMUST00000164753 153 ntBASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Gm25927-201ENSMUST00000175058 117 ntBASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rprd1aQ8VDS4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Gm23931-201ENSMUST00000103842 109 ntBASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Gm5187-201ENSMUST00000117317 991 ntBASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Gm14704-201ENSMUST00000120300 874 ntBASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rprd1aQ8VDS4 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms