Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm13453-201ENSMUST00000118708 357 ntBASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm26315-201ENSMUST00000083890 321 ntBASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup35Q8R4R6 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm17837-201ENSMUST00000186435 985 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm42550-201ENSMUST00000201553 960 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms