Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cd109Q8R422 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cd109Q8R422 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC18.08■□□□□ 0.48
Cd109Q8R422 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC18.08■□□□□ 0.48
Cd109Q8R422 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cd109Q8R422 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.08■□□□□ 0.48
Cd109Q8R422 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd109Q8R422 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC18.08■□□□□ 0.48
Cd109Q8R422 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC18.07■□□□□ 0.48
Cd109Q8R422 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm34767-201ENSMUST00000191813 1062 ntBASIC18.07■□□□□ 0.48
Cd109Q8R422 AC131330.1-201ENSMUST00000227814 1015 ntBASIC18.07■□□□□ 0.48
Cd109Q8R422 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm43858-201ENSMUST00000199418 1778 ntBASIC18.07■□□□□ 0.48
Cd109Q8R422 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm10176-201ENSMUST00000159707 2264 ntBASIC18.07■□□□□ 0.48
Cd109Q8R422 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Cd109Q8R422 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cd109Q8R422 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm18626-201ENSMUST00000221512 1409 ntBASIC18.07■□□□□ 0.48
Cd109Q8R422 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cd109Q8R422 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd109Q8R422 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm5616-201ENSMUST00000165252 384 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm8741-201ENSMUST00000174736 384 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Cd109Q8R422 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cd109Q8R422 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.06■□□□□ 0.48
Cd109Q8R422 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cd109Q8R422 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm5638-201ENSMUST00000118618 1258 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm11331-201ENSMUST00000119764 288 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm17040-202ENSMUST00000170597 889 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm9230-201ENSMUST00000188228 532 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm18304-201ENSMUST00000189162 546 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Gm18730-201ENSMUST00000218038 343 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 AC153974.2-201ENSMUST00000218577 1025 ntBASIC18.06■□□□□ 0.48
Cd109Q8R422 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd109Q8R422 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cd109Q8R422 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cd109Q8R422 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.05■□□□□ 0.48
Cd109Q8R422 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC18.05■□□□□ 0.48
Cd109Q8R422 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC18.05■□□□□ 0.48
Cd109Q8R422 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cd109Q8R422 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC18.05■□□□□ 0.48
Cd109Q8R422 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC18.05■□□□□ 0.48
Cd109Q8R422 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.05■□□□□ 0.48
Cd109Q8R422 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Gm9996-201ENSMUST00000070359 913 ntBASIC18.05■□□□□ 0.48
Cd109Q8R422 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.05■□□□□ 0.48
Cd109Q8R422 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd109Q8R422 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cd109Q8R422 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd109Q8R422 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cd109Q8R422 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms