Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Gm12203-201ENSMUST00000118235 598 ntBASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Gm12209-201ENSMUST00000120089 596 ntBASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Gm24196-201ENSMUST00000179161 110 ntBASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim29Q8R2Q0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim29Q8R2Q0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm8805-201ENSMUST00000117848 313 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm2231-201ENSMUST00000125661 612 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm8652-201ENSMUST00000181363 964 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm27839-201ENSMUST00000184242 106 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm43438-201ENSMUST00000198133 379 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm10012-201ENSMUST00000078252 192 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim29Q8R2Q0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms