Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Gm44262-201ENSMUST00000204969 372 ntBASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Gm44651-201ENSMUST00000207343 372 ntBASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.42■□□□□ 0.22
Chmp7Q8R1T1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Gm7857-201ENSMUST00000117957 358 ntBASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Gm14208-201ENSMUST00000119645 678 ntBASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Gm10312-201ENSMUST00000078515 489 ntBASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp7Q8R1T1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Gm12217-201ENSMUST00000118858 696 ntBASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Gm14999-201ENSMUST00000121039 624 ntBASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Mir3547-201ENSMUST00000175461 88 ntBASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Mir6979-201ENSMUST00000183927 56 ntBASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Mir6927-201ENSMUST00000184494 71 ntBASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms