Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Gm16479-201ENSMUST00000121706 932 ntBASIC12.15□□□□□ -0.46
Clrn1Q8K445 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.15□□□□□ -0.46
Clrn1Q8K445 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn1Q8K445 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Gm2231-201ENSMUST00000125661 612 ntBASIC12.14□□□□□ -0.47
Clrn1Q8K445 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.14□□□□□ -0.47
Clrn1Q8K445 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn1Q8K445 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Gm4271-201ENSMUST00000174444 973 ntBASIC12.13□□□□□ -0.47
Clrn1Q8K445 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.13□□□□□ -0.47
Clrn1Q8K445 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.13□□□□□ -0.47
Clrn1Q8K445 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clrn1Q8K445 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms