Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm4875-201ENSMUST00000118257 786 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm17837-201ENSMUST00000186435 985 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm19931-201ENSMUST00000198920 368 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrtm1Q8K377 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm22175-201ENSMUST00000175007 78 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm2213-201ENSMUST00000197485 688 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrtm1Q8K377 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrtm1Q8K377 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms