Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Proscos-202ENSMUST00000178990 666 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm27486-201ENSMUST00000184923 80 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm19931-201ENSMUST00000198920 368 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Itm2b-204ENSMUST00000228637 783 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm6091-201ENSMUST00000098307 165 ntBASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cpsf4Q8BQZ5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm11425-201ENSMUST00000119608 498 ntBASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Mir7085-201ENSMUST00000184353 66 ntBASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gm9396-201ENSMUST00000076703 567 ntBASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cpsf4Q8BQZ5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms