Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdhr3Q8BL00 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdhr3Q8BL00 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdhr3Q8BL00 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm16202-201ENSMUST00000117532 544 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm5687-201ENSMUST00000118252 640 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm12341-201ENSMUST00000119724 503 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm44397-201ENSMUST00000195950 113 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms