Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn3Q8BHH8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn3Q8BHH8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clrn3Q8BHH8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Gm16202-201ENSMUST00000117532 544 ntBASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clrn3Q8BHH8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gm8213-201ENSMUST00000118191 441 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gm27892-201ENSMUST00000185017 106 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clrn3Q8BHH8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm11478-201ENSMUST00000117851 599 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms