Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Gm12566-201ENSMUST00000121479 359 ntBASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Gm25732-201ENSMUST00000175168 60 ntBASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Gm25700-201ENSMUST00000177693 110 ntBASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Mir6927-201ENSMUST00000184494 71 ntBASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp6nlQ80XC3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp6nlQ80XC3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp6nlQ80XC3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp6nlQ80XC3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp6nlQ80XC3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp6nlQ80XC3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Usp6nlQ80XC3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Gm14921-201ENSMUST00000118643 908 ntBASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Gm44262-201ENSMUST00000204969 372 ntBASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp6nlQ80XC3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp6nlQ80XC3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms