Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm37042-201ENSMUST00000193816 581 ntBASIC11.96□□□□□ -0.49
Pif1Q80SX8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pif1Q80SX8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pif1Q80SX8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pif1Q80SX8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.96□□□□□ -0.5
Pif1Q80SX8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.95□□□□□ -0.5
Pif1Q80SX8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Gm11964-201ENSMUST00000120982 444 ntBASIC11.95□□□□□ -0.5
Pif1Q80SX8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Gm2383-201ENSMUST00000181461 807 ntBASIC11.95□□□□□ -0.5
Pif1Q80SX8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.95□□□□□ -0.5
Pif1Q80SX8 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.95□□□□□ -0.5
Pif1Q80SX8 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.95□□□□□ -0.5
Pif1Q80SX8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pif1Q80SX8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Grk6-205ENSMUST00000224653 2976 ntBASIC11.94□□□□□ -0.5
Pif1Q80SX8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Gm12502-201ENSMUST00000120197 444 ntBASIC11.94□□□□□ -0.5
Pif1Q80SX8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Mir5132-201ENSMUST00000175166 71 ntBASIC11.94□□□□□ -0.5
Pif1Q80SX8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.94□□□□□ -0.5
Pif1Q80SX8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.94□□□□□ -0.5
Pif1Q80SX8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pif1Q80SX8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms