Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm17795-201ENSMUST00000214505 757 ntBASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.06□□□□□ -0.16
Ctdp1Q7TSG2 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Gm5354-201ENSMUST00000182417 973 ntBASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ctdp1Q7TSG2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Gm15823-201ENSMUST00000064305 670 ntBASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdp1Q7TSG2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ctdp1Q7TSG2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms