Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm38341-201ENSMUST00000195357 515 ntBASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gm45865-201ENSMUST00000211815 945 ntBASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gm19163-201ENSMUST00000223313 780 ntBASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Gm7809-201ENSMUST00000153199 742 ntBASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb4Q6P8W9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm12363-201ENSMUST00000122250 668 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm2991-201ENSMUST00000173338 480 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb4Q6P8W9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms