Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Mir6392-201ENSMUST00000184924 108 ntBASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.22□□□□□ -0.13
Krt39Q6IFX4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm6983-201ENSMUST00000214912 628 ntBASIC14.22□□□□□ -0.13
Krt39Q6IFX4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt39Q6IFX4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm15371-201ENSMUST00000117057 784 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm5687-201ENSMUST00000118252 640 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm15823-201ENSMUST00000064305 670 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.21□□□□□ -0.13
Krt39Q6IFX4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt39Q6IFX4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt39Q6IFX4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms