Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Gli3Q61602 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Gm45085-201ENSMUST00000209100 441 ntBASIC16.88■□□□□ 0.29
Gli3Q61602 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Mir326-201ENSMUST00000083637 95 ntBASIC16.88■□□□□ 0.29
Gli3Q61602 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gli3Q61602 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gli3Q61602 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Gm22846-201ENSMUST00000157706 270 ntBASIC16.87■□□□□ 0.29
Gli3Q61602 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Gli3Q61602 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Gli3Q61602 AC137950.2-202ENSMUST00000227150 1635 ntBASIC16.87■□□□□ 0.29
Gli3Q61602 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Gli3Q61602 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.87■□□□□ 0.29
Gli3Q61602 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gli3Q61602 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Gli3Q61602 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Gli3Q61602 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Gm8342-201ENSMUST00000209839 757 ntBASIC16.86■□□□□ 0.29
Gli3Q61602 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC16.86■□□□□ 0.29
Gli3Q61602 BC106175-202ENSMUST00000219344 1213 ntBASIC16.86■□□□□ 0.29
Gli3Q61602 AC130477.1-201ENSMUST00000226982 420 ntBASIC16.86■□□□□ 0.29
Gli3Q61602 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Gli3Q61602 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC16.86■□□□□ 0.29
Gli3Q61602 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Gli3Q61602 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.86■□□□□ 0.29
Gli3Q61602 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.86■□□□□ 0.29
Gli3Q61602 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gli3Q61602 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Gm13700-201ENSMUST00000118624 1128 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC16.85■□□□□ 0.29
Gli3Q61602 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC16.85■□□□□ 0.29
Gli3Q61602 Gm17214-201ENSMUST00000164501 541 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Gm11942-201ENSMUST00000180255 345 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Gm8956-201ENSMUST00000203939 825 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Gm5599-201ENSMUST00000209602 788 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Gli3Q61602 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Gli3Q61602 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gli3Q61602 Gm13286-201ENSMUST00000117750 537 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Gm3329-201ENSMUST00000159873 556 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC16.85■□□□□ 0.29
Gli3Q61602 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gli3Q61602 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Gm5451-201ENSMUST00000080545 579 ntBASIC16.85■□□□□ 0.29
Gli3Q61602 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gli3Q61602 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
Gli3Q61602 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Gm25053-201ENSMUST00000103982 133 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 Gm25922-201ENSMUST00000104281 130 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Gm24679-201ENSMUST00000158762 111 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 Gm24954-201ENSMUST00000178831 110 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 Ighv1-2-201ENSMUST00000195325 378 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 Gm25053-202ENSMUST00000199731 132 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 AC112945.1-201ENSMUST00000226413 514 ntBASIC16.84■□□□□ 0.29
Gli3Q61602 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC16.84■□□□□ 0.29
Gli3Q61602 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gli3Q61602 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms