Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp13a3Q5XF89 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.52□□□□□ -0.09
Atp13a3Q5XF89 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp13a3Q5XF89 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gm18827-201ENSMUST00000188341 790 ntBASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Atp13a3Q5XF89 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Atp13a3Q5XF89 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.49□□□□□ -0.09
Atp13a3Q5XF89 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms