Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Gm6458-201ENSMUST00000211573 635 ntBASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Shroom1Q5SX79 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Gm32025-201ENSMUST00000217960 307 ntBASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Morn2-202ENSMUST00000227729 656 ntBASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shroom1Q5SX79 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Mir877-201ENSMUST00000104738 85 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm17208-201ENSMUST00000168388 535 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm18056-201ENSMUST00000207670 568 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm18061-201ENSMUST00000208350 562 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm18063-201ENSMUST00000208529 568 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gm18052-201ENSMUST00000208750 559 ntBASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shroom1Q5SX79 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms