Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Mir6958-201ENSMUST00000184207 73 ntBASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm8913-201ENSMUST00000209491 641 ntBASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc88aQ5SNZ0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm13736-201ENSMUST00000119272 253 ntBASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm7848-201ENSMUST00000210739 718 ntBASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm39404-201ENSMUST00000216350 313 ntBASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc88aQ5SNZ0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Ntng1-201ENSMUST00000051253 327 ntBASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms